PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Prupe.2G086500.1.p
Common NamePRUPE_ppa026265mg
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Amygdaleae; Prunus
Family Trihelix
Protein Properties Length: 566aa    MW: 64165.4 Da    PI: 6.6402
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Prupe.2G086500.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix94.97.5e-30118203187
            trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm.rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqlea 87 
                         rW++qe+l+L+e+r+ ++++++++++k+plW+evs+ m +e+g++rs k+Ckek+enl k+ykk+keg+ +r  ++ +++++f+qlea
  Prupe.2G086500.1.p 118 RWPRQETLTLLEIRSGLDSKFKETNQKGPLWDEVSRIMgEEHGYQRSGKKCKEKFENLYKYYKKTKEGKAGR--QDGKHYRFFRQLEA 203
                         8*************************************99******************************98..55667*******85 PP

2trihelix54.43.3e-17415496181
            trihelix   1 rWtkqevlaLiearr.emeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpy 81 
                         rWt++ev  Lie+ r ++e + ++ g+ k++lWee+++km   g++rs  +Ckek+en++ + + ++e +kk++++++    y
  Prupe.2G086500.1.p 415 RWTEHEVASLIELIRtSLELTTQDcGCFKEGLWEEIAAKMGCLGYRRSVGECKEKLENMSVYPRMTAECNKKHKQDAKA-NMY 496
                         8***********766155555554689*********************************************9655543.333 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007177.7115178IPR001005SANT/Myb domain
CDDcd122037.16E-23117183No hitNo description
PfamPF138379.8E-20118204No hitNo description
PROSITE profilePS500906.4118176IPR017877Myb-like domain
PROSITE profilePS500906.388408474IPR017877Myb-like domain
SMARTSM007170.14412476IPR001005SANT/Myb domain
PfamPF138372.8E-11414487No hitNo description
CDDcd122032.13E-16414480No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 566 aa     Download sequence    Send to blast
MDEYGVPDLR QLMASRTQFC TTSQFQEPFS AHGNLTAQPN YQPMLVPAGG LVDHLHPPHY  60
STIINGCGAA HPPNNNAAAT TSSAAALYGI DLEHGHGWNN NINVGMNAAD GGNNMNYRWP  120
RQETLTLLEI RSGLDSKFKE TNQKGPLWDE VSRIMGEEHG YQRSGKKCKE KFENLYKYYK  180
KTKEGKAGRQ DGKHYRFFRQ LEAIYGDQTS NQSSTYGRLN PLLYHHTTPN DTVNPKNQEV  240
VQDQKHISCE SLSFSNNSTE FDQTSSSENN DDDLSISAID YFMMNQSMGS LKNEKQTCAR  300
PVNKKSWKAK VEDFVNSQIG KVINTQEAWM EKMLKSIEHR EEERIAQEEE WRKQQAAKFD  360
REVHEFWAKE RAWVESRDAA IMEALGTFSR PGISNHDKDK DDISKLQIPN DTINRWTEHE  420
VASLIELIRT SLELTTQDCG CFKEGLWEEI AAKMGCLGYR RSVGECKEKL ENMSVYPRMT  480
AECNKKHKQD AKANMYHGQL SCYEGQQEVS KRRPDGMGLQ LMDGGLSPSS SNMDVSSSSF  540
HVQFNGGENL WDRYGTVKLG KGKNQ*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007220052.10.0hypothetical protein PRUPE_ppa026265mg
TrEMBLM5X6Z70.0M5X6Z7_PRUPE; Uncharacterized protein
STRINGPOPTR_0008s02580.11e-164(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF20223489
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.14e-83Trihelix family protein